The bombs of an alchemist are influenced by Point-Blank Shot:
"Bombs are considered weapons and can be selected using feats such as Point-Blank Shot and Weapon Focus."
As the range of a bomb is 20 feet (extended to 30 feet by some gear), and Point-Blank Shot modifies up to 30 feet, the bombs are always under influence of Point-Blank Shot.
PCGen seems to miss that when printing the character of an appropriate alchemist.
Linux, java, PCGen 6.06.00
FYI - Point blank always worked.